Publications



Freese, N, Schnabel, E., and Frugoli, J. (2020) Whole genome Bisulfite Sequencing of Medicago truncatula A17 wild type and lss mutants,
	BMC Research Notes, doi: 10.1186/s13104-020-05012-6.
	
Roy, S., Liu, W., Nandety, R.S., Crook, A., Mysore, K.S., Pisariu, C. Frugoli, J., Dickstein ,R., Udvardi, M. (2020) Celebrating 20 years of
	genetic discoveries in legume nodulation and symbiotic nitrogen fixation, Plant Cell, doi:10.1105/tpc.19.00279
		
Poehlman, W, Schnabel, E., Chavan, S., Frugoli, J. and Feltus, F.A. (2019) Identifying Temporally Regulated Root Nodulation Biomarkers
	Using Time Series Gene Co-expression Network Analysis, Frontiers in Plant Biology, doi: 10.3389/fpls.2019.01409.

Müller, L.M., Flokova, K. Schnabel, E., Sun, E., Fei, Z. Frugoli, J., Bouwmeester, H.J., Harrison, M.J. (2019) A CLE-SUNN module regulates
	strigolactone content and fungal colonization in arbuscular mycorrhiza, Nature Plants, 5:933-939, doi:10.1038/s41477- 019-0501-1.

Nowak, S, Schnabel, E. and Frugoli, J. (2019) The Medicago truncatula CLAVATA3-LIKE CLE12/13 signaling peptides regulate nodule
	number depending on the CORYNE but not the COMPACT ROOT ARCHITECTURE2 receptor, Plant Signaling and Behavior,
	DOI: 10.1080/15592324.2019.1598730

Wen, L., Chen, Y., Schnabel, E., Crook, A., Frugoli, J. (2019) Comparison of Efficiency and Time to Regeneration of Agrobacterium-mediated
	transformation methods in Medicago truncatula, Plant Methods, 15:20, DOI: 10.1186/s13007-019-0404-1.

Chavan, S., Schnabel, E., Saski, C., Frugoli, J. (2018) Fixation and Laser Capture Microdissection (LCM) of plant tissue for RNA extraction
	and RNASeq library preparation, Current Protocols in Plant Biology, 3, 1–19. doi: 10.1002/cppb.20063 

Kassaw, T., Nowak, S., Schnabel, E., and Frugoli, J. (2017) ROOT DETERMINED NODULATION1 is required for M. truncatula CLE12, but not
	CLE13 peptide signaling through the SUNN receptor kinase, Plant Physiology. 174: 2445-2456, doi: 10.1104/pp.17.00278

Crook, A., Schnabel, E.L., and Frugoli, J. (2016) The systemic nodule number regulation kinase SUNN in Medicago truncatula interacts
	with MtCLV2 and MtCRN, Plant Journal, 88: 108-119. doi: 10.1111/tpj.13234

Kassaw, T., Schnabel, E., Bridges, W. and Frugoli, J. (2015) Multiple autoregulation of nodulation (AON) signals identified through split
	root analysis of M. truncatula sunn and rdn1 mutants, Plants 4:209-224, doi: 10.3390/plants4020209

Kassaw, T. and Frugoli, J. (2012) Simple and efficient methods to generate split roots and grafted plants useful for long-distance signaling
	studies in Medicago truncatula and other small plants, Plant Methods, 8:38, doi: 10.1186/1746-4811-8-38
	
Schnabel, E., Karve, A., Kassaw, T., Mukherjee, A., Zhou, X., Hall, T., and Frugoli, J. (2011) The M. truncatula SUNN gene is expressed in
	distance signaling, vascular tissue, similarly to RDN1, consistent with the role of these nodulation regulation genes in long 
	Plant Signaling and Behavior, 7:1-3, doi: 10.4161/psb.7.1.18491
	
Schnabel, E., Kassaw, T., Smith, L., Marsh, J., Oldroyd, G., Long, S. and Frugoli, J. (2011) ROOT DETERMINED NODULATION 1 regulates
	nodule number in M. truncatula and defines a highly conserved, uncharacterized plant gene family, Plant Physiology,
	157: 328-340, doi: 1104/pp.111.178756
	
Schnabel, E., Smith, C., Long, S. and Frugoli, J. (2010) Transcript profiling in M. truncatula  and sunn-1 mutants reveals different expression 
    profiles despite disrupted SUNN gene function in both mutants, Plant Signaling and Behavior, 5:1657-1659, 
	doi: 10.4161/psb.5.12.14000
	
Schnabel, E., Mukherjee, A., Smith, L., Kassaw, T., Long, S. and Frugoli, J. (2010) The lss supernodulation mutant of Medicago truncatula
	reduces expression of the SUNN gene, Plant Physiology 154: 1390-1402, doi: 10.1104/pp.110.164889
	
Ané, J.M., Zhu, H., and Frugoli, J. (2008) Recent advances in Medicago truncatula genomics, International Journal of Plant Genomics,
	Vol 2008, Article ID 256597, doi:10.1155/2008/256597.
	
Huo, X., Schnabel, E., Hughes, K. and Frugoli, J., (2006) RNAi phenotypes and the localization of a protein::GUS fusion imply a role for
	Medicago truncatula PIN genes in nodulation Journal of Plant Growth Regulation, 25:156-165, doi: 10.1007/s00344-005-0106

Schnabel, E., Journet, E.P., Carvalho-Niebel, F., Duc, G., and Frugoli, J. (2005) The Medicago truncatula SUNN gene encoding a CLV1-like
	leucine-rich repeat receptor kinase regulates both nodule number and root length, Plant Molecular Biology, 58:809-822,
	doi:10.1007/s11103-005-8102-y

Schnabel, E. and Frugoli, J. (2004) The PIN and LAX families of auxin transport genes in Medicago truncatula, Molecular Genomics 
    and Genetics, 272:420-432, doi: 10.1007/s11103-005-8102-y

Schnabel, E., Kulikova, O., Penmetsa, V., Bisseling, T., Cook, D., Frugoli, J. (2003) An integrated physical, genetic and cytogenetic map
	around the sunn locus of M. truncatula, Genome, 46(4):665-72, doi: 10.1139/g03-019

Penmetsa, V., Frugoli, J., Smith, L., Long, S. and Cook, D. (2003) Genetic Evidence For Dual Pathway Control Of Nodule Number In
	Medicago truncatula, Plant Physiology, 131:998-1008, doi: 10.1104/pp.015677

Frugoli, J. and VandenBosch, K.A. (2001) Standards and guidelines for genetic nomenclature for the model legume Medicago truncatula,
	Molecular Plant-Microbe Interactions, Vol 13:1364-1367, doi: 10.1094/MPMI.2001.14.12.1364

Frugoli, J. and Harris, J. (2001) Medicago truncatula on the move, Plant Cell, 13: 458-463, doi: 10.1105/tpc.13.3.458

Frugoli, J., McPeek, M., Thomas, T. and McClung, C.R. (1998) Intron loss and gain during the evolution of the catalase gene family in
	angiosperms, Genetics, 149: 355-365.

Frugoli, J., Zhong, H. H., Nuccio, P., McPeek, M., McCourt, P., Thomas, T. and McClung, C. R. (1996) Catalase is encoded by a multi-gene
	family in Arabidopsis thaliana (L.) Heynh, Plant Physiology, Vol. 112:327-336, doi: 10.1104/pp.112.1.327


Book Chapters:
	
Kassaw, T. and Frugoli, J. (2013) Journey to Nodule Formation: From Molecular Dialogue to Nitrogen Fixation, Progress in Symbiotic
	Endophytes, R. Aroca, ed, Springer p3-25.

Frugoli, J. (2008) Medicago truncatula as a model plant in Plant Molecular Biology, in Handbook of New Technologies for Genetic 
	Improvement of Legumes, P.B. Kirti, ed., the Haworth Press, New York pp 339-352.
	
Mukherjee, A. and Frugoli, J. (2007) Advances in Legume/Rhizobial Symbiosis Research, in Recent Developments in Medicinal 
	Plant Research, Capasso, A., ed, Research Signpost Press, pp 373-392.